*Fenerbahçe SK 9-0 B36 Torshavn
| 01.08.2006 | B36 Torshavn | 0-5 | Fenerbahçe SK | |
| 26.07.2006 | Fenerbahçe SK | 4-0 | B36 Torshavn | |
Cork City 0-4 FK Crvena Zvezda *
| 02.08.2006 | FK Crvena Zvezda | 3-0 | Cork City | |
| 26.07.2006 | Cork City | 0-1 | FK Crvena Zvezda | |
FK Ekranas 3-9 Dinamo Zagreb *
| 02.08.2006 | Dinamo Zagreb | 5-2 | FK Ekranas | |
| 25.07.2006 | FK Ekranas | 1-4 | Dinamo Zagreb | |
FC København 4-2 MyPa
| 02.08.2006 | MyPa | 2-2 | FC København | |
| 26.07.2006 | FC København | 2-0 | MyPa | |
FC Zürich 2-3 RB Salzburg *
| 02.08.2006 | RB Salzburg | 2-0 | FC Zürich | |
| 26.07.2006 | FC Zürich | 2-1 | RB Salzburg | |
FH Hafnarfjordur 0-3 Legia Warszawa *
| 02.08.2006 | Legia Warszawa | 2-0 | FH Hafnarfjordur | |
| 26.07.2006 | FH Hafnarfjordur | 0-1 | Legia Warszawa | |
Metalurgs Liepaja 1-8 Dynamo Kyiv *
| 02.08.2006 | Dynamo Kyiv | 4-0 | Metalurgs Liepaja | |
| 26.07.2006 | Metalurgs Liepaja | 1-4 | Dynamo Kyiv | |
Djurgårdens IF 2-3 MFK Ruzomberok *
| 02.08.2006 | MFK Ruzomberok | 3-1 | Djurgårdens IF | |
| 26.07.2006 | Djurgårdens IF | 1-0 | MFK Ruzomberok | |
*Mlada Boleslav 5-3 Valerenga
| 02.08.2006 | Valerenga | 2-2 | Mlada Boleslav | |
| 26.07.2006 | Mlada Boleslav | 3-1 | Valerenga | |
Debrecen VSC 2-5 Rabotnicki Skopje *
| 02.08.2006 | Rabotnicki Skopje | 4-1 | Debrecen VSC | |
| 26.07.2006 | Debrecen VSC | 1-1 | Rabotnicki Skopje | |
*Levski Sofia 4-0 Sioni Bolnisi
| 02.08.2006 | Sioni Bolnisi | 0-2 | Levski Sofia | |
| 26.07.2006 | Levski Sofia | 2-0 | Sioni Bolnisi | |
*Hearts FC 3-0 Siroki Brijeg
| 02.08.2006 | Siroki Brijeg | 0-0 | Hearts FC | |
| 26.07.2006 | Hearts FC | 3-0 | Siroki Brijeg | |
Sheriff Tiraspol 1-1 Spartak Moscow *
| 02.08.2006 | Spartak Moscow | 0-0 | Sheriff Tiraspol | |
| 26.07.2006 | Sheriff Tiraspol | 1-1 | Spartak Moscow | |
ND Gorica 0-5 Steaua Bucuresti *
| 02.08.2006 | Steaua Bucuresti | 3-0 | ND Gorica | |
| 26.07.2006 | ND Gorica | 0-2 | Steaua Bucuresti | |