FK Sarajevo 1-1 Zrinjski Mostar
| 21.10.2009 | Zrinjski Mostar | 0-0 | FK Sarajevo | |
| 30.09.2009 | FK Sarajevo | 1-1 | Zrinjski Mostar | |
Celik Zenica 1-3 FK Slavija
| 21.10.2009 | FK Slavija | 3-0 | Celik Zenica | |
| 30.09.2009 | Celik Zenica | 1-0 | FK Slavija | |
Velez Mostar 1-2 FK Zeljeznicar *
| 21.10.2009 | FK Zeljeznicar | 2-1 | Velez Mostar | |
| 30.09.2009 | Velez Mostar | 0-0 | FK Zeljeznicar | |
NK Travnik 1-3 Sloboda Tuzla
| 21.10.2009 | Sloboda Tuzla | 2-0 | NK Travnik | |
| 30.09.2009 | NK Travnik | 1-1 | Sloboda Tuzla | |
*Leotar Trebinje 4-0 Olimpik Sarajevo
| 22.10.2009 | Olimpik Sarajevo | 0-1 | Leotar Trebinje | |
| 30.09.2009 | Leotar Trebinje | 3-0 | Olimpik Sarajevo | |
*Borac Banja Luka 3-1 Siroki Brijeg
| 21.10.2009 | Siroki Brijeg | 1-1 | Borac Banja Luka | |
| 30.09.2009 | Borac Banja Luka | 2-0 | Siroki Brijeg | |
FK Modrica 2-3 Sloga Doboj
| 21.10.2009 | Sloga Doboj | 1-1 | FK Modrica | |
| 29.09.2009 | FK Modrica | 1-2 | Sloga Doboj | |
Sloga Uskoplje 1-3 Rudar Prijedor
| 21.10.2009 | Rudar Prijedor | 1-0 | Sloga Uskoplje | |
| 30.09.2009 | Sloga Uskoplje | 1-2 | Rudar Prijedor | |