Dukla Banska Bystrica 3-4 Spartak Trnava *
| 06.11.2012 | Spartak Trnava | 3-1 | Dukla Banska Bystrica | |
| 23.10.2012 | Dukla Banska Bystrica | 2-1 | Spartak Trnava | |
FK Senica 3-3 MSK Zilina *
| 06.11.2012 | MSK Zilina | 1-2/p.4-2 | FK Senica | |
| 23.10.2012 | FK Senica | 1-2 | MSK Zilina | |
*MFK Kosice 3-3 Spartak Myjava
| 06.11.2012 | Spartak Myjava | 3-1 | MFK Kosice | |
| 24.10.2012 | MFK Kosice | 2-0 | Spartak Myjava | |
*Slovan Bratislava 3-3 MFK Ruzomberok
| 06.11.2012 | MFK Ruzomberok | 3-1 | Slovan Bratislava | |
| 24.10.2012 | Slovan Bratislava | 2-0 | MFK Ruzomberok | |