Cliftonville Belfast 2-5 AEK Larnaca *
| 21.07.2016 | AEK Larnaca | 2-0 | Cliftonville Belfast | |
| 14.07.2016 | Cliftonville Belfast | 2-3 | AEK Larnaca | |
*Beitar Jerusalem 3-3 Omonia Nicosia
| 21.07.2016 | Omonia Nicosia | 3-2 | Beitar Jerusalem | |
| 14.07.2016 | Beitar Jerusalem | 1-0 | Omonia Nicosia | |
Beroe Stara Zagora 1-2 HJK Helsinki *
| 21.07.2016 | HJK Helsinki | 1-0 | Beroe Stara Zagora | |
| 14.07.2016 | Beroe Stara Zagora | 1-1 | HJK Helsinki | |
*Birkirkara FC 2-1 Hearts FC
| 21.07.2016 | Hearts FC | 1-2 | Birkirkara FC | |
| 14.07.2016 | Birkirkara FC | 0-0 | Hearts FC | |
*FK Vojvodina 3-1 Connah's Quay
| 21.07.2016 | Connah's Quay | 1-2 | FK Vojvodina | |
| 14.07.2016 | FK Vojvodina | 1-0 | Connah's Quay | |
CSM Studentesc Iasi 3-4 Hajduk Split *
| 21.07.2016 | Hajduk Split | 2-1 | CSM Studentesc Iasi | |
| 14.07.2016 | CSM Studentesc Iasi | 2-2 | Hajduk Split | |
*Dinamo Minsk 2-1 St Patrick's Dublin
| 21.07.2016 | St Patrick's Dublin | 0-1 | Dinamo Minsk | |
| 14.07.2016 | Dinamo Minsk | 1-1 | St Patrick's Dublin | |
*AIK Fotboll 2-0 Europa FC
| 21.07.2016 | Europa FC | 0-1 | AIK Fotboll | |
| 14.07.2016 | AIK Fotboll | 1-0 | Europa FC | |
*FC Midtjylland 5-2 FC Vaduz
| 21.07.2016 | FC Vaduz | 2-2 | FC Midtjylland | |
| 14.07.2016 | FC Midtjylland | 3-0 | FC Vaduz | |
*Racing Genk 2-2 FK Buducnost
| 21.07.2016 | FK Buducnost | 2-0/p.2-4 | Racing Genk | |
| 14.07.2016 | Racing Genk | 2-0 | FK Buducnost | |
Slovan Bratislava 0-3 FK Jelgava* *
| 21.07.2016 | FK Jelgava* | 3-0 | Slovan Bratislava | |
| 14.07.2016 | Slovan Bratislava | 0-0 | FK Jelgava* | |
*Austria Wien 5-1 FK Kukesi
| 21.07.2016 | FK Kukesi | 1-4 | Austria Wien | |
| 14.07.2016 | Austria Wien | 1-0 | FK Kukesi | |
FK Partizan 0-0 Zaglebie Lubin *
| 21.07.2016 | Zaglebie Lubin | 0-0/p.4-3 | FK Partizan | |
| 14.07.2016 | FK Partizan | 0-0 | Zaglebie Lubin | |
*Aberdeen FC 4-0 FK Ventspils
| 21.07.2016 | FK Ventspils | 0-1 | Aberdeen FC | |
| 14.07.2016 | Aberdeen FC | 3-0 | FK Ventspils | |
KR Reykjavik 4-5 Grasshoppers *
| 21.07.2016 | Grasshoppers | 2-1 | KR Reykjavik | |
| 14.07.2016 | KR Reykjavik | 3-3 | Grasshoppers | |
Hibernian FC 1-1 Brøndby IF *
| 21.07.2016 | Brøndby IF | 0-1/p.5-3 | Hibernian FC | |
| 14.07.2016 | Hibernian FC | 0-1 | Brøndby IF | |
Kairat Almaty 2-3 Maccabi Tel Aviv *
| 21.07.2016 | Maccabi Tel Aviv | 2-1 | Kairat Almaty | |
| 14.07.2016 | Kairat Almaty | 1-1 | Maccabi Tel Aviv | |
*Maribor 1-1 Levski Sofia
| 21.07.2016 | Levski Sofia | 1-1 | Maribor | |
| 14.07.2016 | Maribor | 0-0 | Levski Sofia | |
Maccabi Haifa 2-2 Nomme Kalju *
| 21.07.2016 | Nomme Kalju | 1-1/p.5-3 | Maccabi Haifa | |
| 14.07.2016 | Maccabi Haifa | 1-1 | Nomme Kalju | |
MTK Budapest 1-4 Gabala FC *
| 21.07.2016 | Gabala FC | 2-0 | MTK Budapest | |
| 14.07.2016 | MTK Budapest | 1-2 | Gabala FC | |
*PAS Giannina 4-3 Odd BK
| 21.07.2016 | Odd BK | 3-1 AET | PAS Giannina | |
| 14.07.2016 | PAS Giannina | 3-0 | Odd BK | |
Piast Gliwice 0-3 IFK Göteborg *
| 21.07.2016 | IFK Göteborg | 0-0 | Piast Gliwice | |
| 14.07.2016 | Piast Gliwice | 0-3 | IFK Göteborg | |
RoPS Rovaniemi 1-4 Lokomotiva Zagreb *
| 21.07.2016 | Lokomotiva Zagreb | 3-0 | RoPS Rovaniemi | |
| 14.07.2016 | RoPS Rovaniemi | 1-1 | Lokomotiva Zagreb | |
Shakhter Soligorsk 2-3 Domžale *
| 21.07.2016 | Domžale | 2-1 | Shakhter Soligorsk | |
| 14.07.2016 | Shakhter Soligorsk | 1-1 | Domžale | |
Shirak FC 1-3 Spartak Trnava *
| 21.07.2016 | Spartak Trnava | 2-0 | Shirak FC | |
| 14.07.2016 | Shirak FC | 1-1 | Spartak Trnava | |
Neftchi Baku 0-1 Shkendija'79 *
| 21.07.2016 | Shkendija'79 | 1-0 | Neftchi Baku | |
| 14.07.2016 | Neftchi Baku | 0-0 | Shkendija'79 | |
Levadia Tallinn 3-3 Slavia Praha *
| 21.07.2016 | Slavia Praha | 2-0 | Levadia Tallinn | |
| 14.07.2016 | Levadia Tallinn | 3-1 | Slavia Praha | |
*SønderjyskE 4-3 Stromsgodset IF
| 21.07.2016 | Stromsgodset IF | 2-2 AET | SønderjyskE | |
| 14.07.2016 | SønderjyskE | 2-1 | Stromsgodset IF | |
Debrecen VSC 1-3 Torpedo Zhodino *
| 21.07.2016 | Torpedo Zhodino | 1-0 | Debrecen VSC | |
| 14.07.2016 | Debrecen VSC | 1-2 | Torpedo Zhodino | |
*Videoton FC 3-1 Cukaricki Belgrade
| 21.07.2016 | Cukaricki Belgrade | 1-1 | Videoton FC | |
| 14.07.2016 | Videoton FC | 2-0 | Cukaricki Belgrade | |
Zimbru Chisinau 2-7 Ankaraspor *
| 21.07.2016 | Ankaraspor | 5-0 | Zimbru Chisinau | |
| 14.07.2016 | Zimbru Chisinau | 2-2 | Ankaraspor | |