Aberdeen FC 1-2 Maribor *
| 04.08.2016 | Maribor | 1-0 | Aberdeen FC | |
| 28.07.2016 | Aberdeen FC | 1-1 | Maribor | |
Admira 1-4 Slovan Liberec *
| 03.08.2016 | Slovan Liberec | 2-0 | Admira | |
| 28.07.2016 | Admira | 1-2 | Slovan Liberec | |
*AS Saint-Étienne 1-0 AEK Athens
| 04.08.2016 | AEK Athens | 0-1 | AS Saint-Étienne | |
| 28.07.2016 | AS Saint-Étienne | 0-0 | AEK Athens | |
*Ankaraspor 3-0 Nomme Kalju
| 04.08.2016 | Nomme Kalju | 0-2 | Ankaraspor | |
| 28.07.2016 | Ankaraspor | 1-0 | Nomme Kalju | |
*Austria Wien 1-1 Spartak Trnava
| 04.08.2016 | Spartak Trnava | 0-1/p.4-5 | Austria Wien | |
| 28.07.2016 | Austria Wien | 0-1 | Spartak Trnava | |
*AZ Alkmaar 3-1 PAS Giannina
| 04.08.2016 | PAS Giannina | 1-2 | AZ Alkmaar | |
| 28.07.2016 | AZ Alkmaar | 1-0 | PAS Giannina | |
FK Jelgava* 1-4 Beitar Jerusalem *
| 04.08.2016 | Beitar Jerusalem | 3-0 | FK Jelgava* | |
| 28.07.2016 | FK Jelgava* | 1-1 | Beitar Jerusalem | |
Birkirkara FC 1-6 FK Krasnodar *
| 04.08.2016 | FK Krasnodar | 3-1 | Birkirkara FC | |
| 28.07.2016 | Birkirkara FC | 0-3 | FK Krasnodar | |
*Racing Genk 3-1 Cork City
| 04.08.2016 | Cork City | 1-2 | Racing Genk | |
| 28.07.2016 | Racing Genk | 1-0 | Cork City | |
Heracles Almelo 1-1 FC Arouca *
| 04.08.2016 | FC Arouca | 0-0 | Heracles Almelo | |
| 28.07.2016 | Heracles Almelo | 1-1 | FC Arouca | |
FC Luzern 1-4 Sassuolo Calcio *
| 04.08.2016 | Sassuolo Calcio | 3-0 | FC Luzern | |
| 28.07.2016 | FC Luzern | 1-1 | Sassuolo Calcio | |
*FK Vojvodina 3-1 Dinamo Minsk
| 04.08.2016 | Dinamo Minsk | 0-2 | FK Vojvodina | |
| 28.07.2016 | FK Vojvodina | 1-1 | Dinamo Minsk | |
*Grasshoppers 5-4 Apollon Limassol
| 04.08.2016 | Apollon Limassol | 3-3 AET | Grasshoppers | |
| 28.07.2016 | Grasshoppers | 2-1 | Apollon Limassol | |
FK Aleksandriya 1-6 Hajduk Split *
| 04.08.2016 | Hajduk Split | 3-1 | FK Aleksandriya | |
| 28.07.2016 | FK Aleksandriya | 0-3 | Hajduk Split | |
Hertha BSC 2-3 Brøndby IF *
| 04.08.2016 | Brøndby IF | 3-1 | Hertha BSC | |
| 28.07.2016 | Hertha BSC | 1-0 | Brøndby IF | |
*IFK Göteborg 3-2 HJK Helsinki
| 04.08.2016 | HJK Helsinki | 0-2 | IFK Göteborg | |
| 28.07.2016 | IFK Göteborg | 1-2 | HJK Helsinki | |
*Istanbul Basaksehir 2-2 HNK Rijeka
| 04.08.2016 | HNK Rijeka | 2-2 | Istanbul Basaksehir | |
| 28.07.2016 | Istanbul Basaksehir | 0-0 | HNK Rijeka | |
*KAA Gent 5-0 Viitorul Constanta
| 04.08.2016 | Viitorul Constanta | 0-0 | KAA Gent | |
| 28.07.2016 | KAA Gent | 5-0 | Viitorul Constanta | |
*Lokomotiva Zagreb 3-2 Vorskla
| 04.08.2016 | Vorskla | 2-3 | Lokomotiva Zagreb | |
| 28.07.2016 | Lokomotiva Zagreb | 0-0 | Vorskla | |
Pandurii Targu Jiu 2-5 Maccabi Tel Aviv *
| 04.08.2016 | Maccabi Tel Aviv | 2-1 | Pandurii Targu Jiu | |
| 28.07.2016 | Pandurii Targu Jiu | 1-3 | Maccabi Tel Aviv | |
*Panathinaikos 3-0 AIK Fotboll
| 04.08.2016 | AIK Fotboll | 0-2 | Panathinaikos | |
| 28.07.2016 | Panathinaikos | 1-0 | AIK Fotboll | |
*Shkendija'79 2-1 Mlada Boleslav
| 04.08.2016 | Mlada Boleslav | 1-0 | Shkendija'79 | |
| 28.07.2016 | Shkendija'79 | 2-0 | Mlada Boleslav | |
*Slavia Praha 1-1 Rio Ave
| 04.08.2016 | Rio Ave | 1-1 | Slavia Praha | |
| 28.07.2016 | Slavia Praha | 0-0 | Rio Ave | |
*AEK Larnaca 2-1 Spartak Moscow
| 04.08.2016 | Spartak Moscow | 0-1 | AEK Larnaca | |
| 28.07.2016 | AEK Larnaca | 1-1 | Spartak Moscow | |
Zaglebie Lubin 2-3 SønderjyskE *
| 04.08.2016 | SønderjyskE | 1-1 | Zaglebie Lubin | |
| 28.07.2016 | Zaglebie Lubin | 1-2 | SønderjyskE | |
Torpedo Zhodino 0-3 Rapid Wien *
| 04.08.2016 | Rapid Wien | 3-0 | Torpedo Zhodino | |
| 28.07.2016 | Torpedo Zhodino | 0-0 | Rapid Wien | |
Videoton FC 1-2 FC Midtjylland *
| 04.08.2016 | FC Midtjylland | 1-1 AET | Videoton FC | |
| 28.07.2016 | Videoton FC | 0-1 | FC Midtjylland | |