FK Slavija 1-6 FK Zeljeznicar *
| 23.10.2012 | FK Zeljeznicar | 3-0 | FK Slavija | |
| 03.10.2012 | FK Slavija | 1-3 | FK Zeljeznicar | |
HNK Orasje 0-7 Siroki Brijeg *
| 24.10.2012 | Siroki Brijeg | 1-0 | HNK Orasje | |
| 03.10.2012 | HNK Orasje | 0-6 | Siroki Brijeg | |
*Olimpik Sarajevo 0-0 Capljina
| 24.10.2012 | Capljina | 0-0/p.1-4 | Olimpik Sarajevo | |
| 03.10.2012 | Olimpik Sarajevo | 0-0 | Capljina | |
*GOSK Gabela 1-0 Radnik Bijeljina
| 24.10.2012 | Radnik Bijeljina | 0-0 | GOSK Gabela | |
| 03.10.2012 | GOSK Gabela | 1-0 | Radnik Bijeljina | |
*Celik Zenica 3-0 Rijeka Vitez
| 24.10.2012 | Rijeka Vitez | 0-1 | Celik Zenica | |
| 03.10.2012 | Celik Zenica | 2-0 | Rijeka Vitez | |
Sutjeska Foca 2-3 Sloga Doboj *
| 24.10.2012 | Sloga Doboj | 2-1 | Sutjeska Foca | |
| 03.10.2012 | Sutjeska Foca | 1-1 | Sloga Doboj | |
*Zrinjski Mostar 4-3 FK Sarajevo
| 24.10.2012 | FK Sarajevo | 2-1 | Zrinjski Mostar | |
| 03.10.2012 | Zrinjski Mostar | 3-1 | FK Sarajevo | |
*Zvijezda Gradacac 4-2 Velez Mostar
| 24.10.2012 | Velez Mostar | 0-3 | Zvijezda Gradacac | |
| 03.10.2012 | Zvijezda Gradacac | 1-2 | Velez Mostar | |